Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 MEP1AP4-201ENST00000423244 1087 ntBASIC11.68□□□□□ -0.54
RAB40CQ96S21 TSSK5P-201ENST00000423978 907 ntBASIC11.68□□□□□ -0.54
RAB40CQ96S21 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AC093214.1-201ENST00000511688 1107 ntBASIC11.68□□□□□ -0.54
RAB40CQ96S21 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AL390955.2-201ENST00000603032 514 ntBASIC11.68□□□□□ -0.54
RAB40CQ96S21 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 CR392039.2-201ENST00000623182 509 ntBASIC11.68□□□□□ -0.54
RAB40CQ96S21 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 LINC02486-201ENST00000604157 3000 ntBASIC11.68□□□□□ -0.54
RAB40CQ96S21 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC011481.3-201ENST00000623895 5594 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC009477.1-201ENST00000452936 217 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 CYMP-203ENST00000474680 1263 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 KRT18P25-201ENST00000508931 1278 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 RNA5SP421-201ENST00000516864 134 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC135586.1-201ENST00000539323 574 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 AC004466.1-201ENST00000599515 1080 ntBASIC11.67□□□□□ -0.54
RAB40CQ96S21 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB40CQ96S21 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB40CQ96S21 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms