Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 FAM90A7P-201ENST00000382628 1395 ntBASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 FAM90A23P-201ENST00000400136 1395 ntBASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 NCLP1-201ENST00000445357 1963 ntBASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.75■□□□□ 0.27
SMARCC2Q8TAQ2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 AC133540.1-201ENST00000620845 1019 ntBASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SMARCC2Q8TAQ2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AC007952.5-201ENST00000572818 1486 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AC073548.1-201ENST00000624088 1882 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 TUBBP5-203ENST00000508529 1334 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AL008707.1-201ENST00000422498 534 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 OR2R1P-201ENST00000441404 914 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AC125604.1-201ENST00000496255 707 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 PGAM1P5-201ENST00000548011 764 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AC009779.1-201ENST00000551138 283 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AL132994.2-201ENST00000603120 687 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AL645939.5-201ENST00000606834 243 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AL805961.1-203ENST00000641078 1258 ntBASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SMARCC2Q8TAQ2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 LINC02486-201ENST00000604157 3000 ntBASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 MIR769-201ENST00000390225 118 ntBASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 CYP46A4P-201ENST00000414953 267 ntBASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMARCC2Q8TAQ2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms