Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 RPS9P1-201ENST00000419943 583 ntBASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 AC067750.1-201ENST00000608826 6545 ntBASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.27□□□□□ -0.28
H3F3CQ6NXT2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AL583805.1-201ENST00000391389 531 ntBASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 RPL8P2-201ENST00000430538 502 ntBASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 RPS2P36-201ENST00000456516 831 ntBASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AC007718.1-201ENST00000621078 280 ntBASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AC006480.2-201ENST00000609770 1337 ntBASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.27□□□□□ -0.29
H3F3CQ6NXT2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms