Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SEC61A1P61619 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC61A1P61619 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SEC61A1P61619 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SEC61A1P61619 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 KRT8P14-201ENST00000414254 1442 ntBASIC12.66□□□□□ -0.38
SEC61A1P61619 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SEC61A1P61619 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.66□□□□□ -0.38
SEC61A1P61619 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 FO681548.1-201ENST00000455617 1132 ntBASIC12.66□□□□□ -0.38
SEC61A1P61619 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.66□□□□□ -0.38
SEC61A1P61619 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.66□□□□□ -0.38
SEC61A1P61619 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.66□□□□□ -0.38
SEC61A1P61619 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.66□□□□□ -0.38
SEC61A1P61619 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC61A1P61619 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 PCDHB18P-202ENST00000526308 3197 ntBASIC12.65□□□□□ -0.38
SEC61A1P61619 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 HLA-K-203ENST00000430151 1046 ntBASIC12.65□□□□□ -0.38
SEC61A1P61619 EIF3FP3-201ENST00000434851 1086 ntBASIC12.65□□□□□ -0.38
SEC61A1P61619 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61A1P61619 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61A1P61619 AL583810.1-201ENST00000553344 1045 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms