Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 CICP20-201ENST00000443330 2801 ntBASIC16.47■□□□□ 0.23
CHMP4BP1P59074 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
CHMP4BP1P59074 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AC011474.4-201ENST00000623523 2076 ntBASIC16.46■□□□□ 0.23
CHMP4BP1P59074 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 RPL8P2-201ENST00000430538 502 ntBASIC16.46■□□□□ 0.23
CHMP4BP1P59074 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 KRT8P21-201ENST00000430398 1491 ntBASIC16.46■□□□□ 0.23
CHMP4BP1P59074 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 AC089987.1-201ENST00000551654 2209 ntBASIC16.46■□□□□ 0.23
CHMP4BP1P59074 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP4BP1P59074 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP4BP1P59074 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.46■□□□□ 0.22
CHMP4BP1P59074 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CHMP4BP1P59074 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.46■□□□□ 0.22
CHMP4BP1P59074 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP4BP1P59074 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CHMP4BP1P59074 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms