Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01165-201ENST00000445190 1623 ntBASIC13.75□□□□□ -0.21
VSX2P58304 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 AC092053.3-201ENST00000641308 4975 ntBASIC13.75□□□□□ -0.21
VSX2P58304 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
VSX2P58304 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.75□□□□□ -0.21
VSX2P58304 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.75□□□□□ -0.21
VSX2P58304 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 NUP210P1-202ENST00000504322 710 ntBASIC13.75□□□□□ -0.21
VSX2P58304 AC245884.6-201ENST00000515672 1067 ntBASIC13.75□□□□□ -0.21
VSX2P58304 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 MIR3188-201ENST00000583494 85 ntBASIC13.75□□□□□ -0.21
VSX2P58304 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.75□□□□□ -0.21
VSX2P58304 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.75□□□□□ -0.21
VSX2P58304 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 AC015909.3-201ENST00000572855 1794 ntBASIC13.75□□□□□ -0.21
VSX2P58304 AC126335.2-201ENST00000623362 4637 ntBASIC13.75□□□□□ -0.21
VSX2P58304 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 HSPA8P5-201ENST00000456928 2069 ntBASIC13.75□□□□□ -0.21
VSX2P58304 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VSX2P58304 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VSX2P58304 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VSX2P58304 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 RNA5SP359-201ENST00000364838 113 ntBASIC13.74□□□□□ -0.21
VSX2P58304 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 AC092580.1-201ENST00000433998 658 ntBASIC13.74□□□□□ -0.21
VSX2P58304 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 AC006335.1-201ENST00000445200 547 ntBASIC13.74□□□□□ -0.21
VSX2P58304 AC073150.1-201ENST00000450406 1084 ntBASIC13.74□□□□□ -0.21
VSX2P58304 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.74□□□□□ -0.21
VSX2P58304 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 POU5F1P2-201ENST00000521750 823 ntBASIC13.74□□□□□ -0.21
VSX2P58304 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.74□□□□□ -0.21
VSX2P58304 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.74□□□□□ -0.21
VSX2P58304 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VSX2P58304 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 LINC01230-201ENST00000625222 3017 ntBASIC13.74□□□□□ -0.21
VSX2P58304 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VSX2P58304 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.74□□□□□ -0.21
VSX2P58304 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms