Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC10.67□□□□□ -0.7
CMC4P56277 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC10.67□□□□□ -0.7
CMC4P56277 ELK2AP-201ENST00000392510 1007 ntBASIC10.67□□□□□ -0.7
CMC4P56277 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 AL662890.1-201ENST00000396818 632 ntBASIC10.67□□□□□ -0.7
CMC4P56277 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 AC092580.1-201ENST00000433998 658 ntBASIC10.67□□□□□ -0.7
CMC4P56277 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC10.67□□□□□ -0.7
CMC4P56277 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 NOP2-211ENST00000540228 668 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.67□□□□□ -0.7
CMC4P56277 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CMC4P56277 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 AC015656.1-201ENST00000624209 3578 ntBASIC10.67□□□□□ -0.7
CMC4P56277 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 AC007686.3-201ENST00000619017 3487 ntBASIC10.67□□□□□ -0.7
CMC4P56277 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC10.67□□□□□ -0.7
CMC4P56277 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.67□□□□□ -0.7
CMC4P56277 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CMC4P56277 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.67□□□□□ -0.7
CMC4P56277 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 LINC00552-201ENST00000625151 2579 ntBASIC10.66□□□□□ -0.7
CMC4P56277 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
CMC4P56277 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC10.66□□□□□ -0.7
CMC4P56277 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 AC005077.2-201ENST00000449786 690 ntBASIC10.66□□□□□ -0.7
CMC4P56277 RN7SL11P-201ENST00000471305 293 ntBASIC10.66□□□□□ -0.7
CMC4P56277 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.66□□□□□ -0.7
CMC4P56277 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 AC093752.3-201ENST00000567343 901 ntBASIC10.66□□□□□ -0.7
CMC4P56277 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 AL133338.1-201ENST00000565695 1517 ntBASIC10.66□□□□□ -0.7
CMC4P56277 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms