Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.73■□□□□ 0.11
PMS1P54277 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.73■□□□□ 0.11
PMS1P54277 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.73■□□□□ 0.11
PMS1P54277 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 XBP1P1-201ENST00000436573 652 ntBASIC15.73■□□□□ 0.11
PMS1P54277 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 MTX1P1-201ENST00000440904 838 ntBASIC15.73■□□□□ 0.11
PMS1P54277 KRT223P-202ENST00000449164 1292 ntBASIC15.73■□□□□ 0.11
PMS1P54277 HLA-J-204ENST00000495278 958 ntBASIC15.73■□□□□ 0.11
PMS1P54277 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.73■□□□□ 0.11
PMS1P54277 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.73■□□□□ 0.11
PMS1P54277 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.73■□□□□ 0.11
PMS1P54277 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.73■□□□□ 0.11
PMS1P54277 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.73■□□□□ 0.11
PMS1P54277 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.73■□□□□ 0.11
PMS1P54277 AC008805.1-201ENST00000590892 364 ntBASIC15.73■□□□□ 0.11
PMS1P54277 AC022748.3-201ENST00000621828 275 ntBASIC15.73■□□□□ 0.11
PMS1P54277 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PMS1P54277 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.73■□□□□ 0.11
PMS1P54277 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.73■□□□□ 0.11
PMS1P54277 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PMS1P54277 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.72■□□□□ 0.11
PMS1P54277 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.72■□□□□ 0.11
PMS1P54277 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.72■□□□□ 0.11
PMS1P54277 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PMS1P54277 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.72■□□□□ 0.11
PMS1P54277 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.72■□□□□ 0.11
PMS1P54277 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PMS1P54277 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 AK2P2-201ENST00000439142 405 ntBASIC15.72■□□□□ 0.11
PMS1P54277 GOLGA2P4-201ENST00000441462 777 ntBASIC15.72■□□□□ 0.11
PMS1P54277 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.72■□□□□ 0.11
PMS1P54277 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PMS1P54277 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.72■□□□□ 0.11
PMS1P54277 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.72■□□□□ 0.11
PMS1P54277 AP005482.1-201ENST00000563722 1273 ntBASIC15.72■□□□□ 0.11
PMS1P54277 AC133552.6-201ENST00000613406 534 ntBASIC15.72■□□□□ 0.11
PMS1P54277 AL591471.1-201ENST00000621855 229 ntBASIC15.72■□□□□ 0.11
PMS1P54277 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.72■□□□□ 0.11
PMS1P54277 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PMS1P54277 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.72■□□□□ 0.11
PMS1P54277 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PMS1P54277 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PMS1P54277 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PMS1P54277 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.72■□□□□ 0.11
PMS1P54277 AC005562.1-201ENST00000583030 3219 ntBASIC15.72■□□□□ 0.11
PMS1P54277 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PMS1P54277 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.71■□□□□ 0.11
PMS1P54277 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PMS1P54277 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PMS1P54277 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms