Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.92□□□□□ -0.18
PDX1P52945 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.92□□□□□ -0.18
PDX1P52945 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.92□□□□□ -0.18
PDX1P52945 RN7SL818P-201ENST00000485099 259 ntBASIC13.92□□□□□ -0.18
PDX1P52945 AC114947.1-202ENST00000514136 344 ntBASIC13.92□□□□□ -0.18
PDX1P52945 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.92□□□□□ -0.18
PDX1P52945 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.92□□□□□ -0.18
PDX1P52945 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 RN7SL725P-201ENST00000606439 259 ntBASIC13.92□□□□□ -0.18
PDX1P52945 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PDX1P52945 MIR6858-201ENST00000620733 67 ntBASIC13.92□□□□□ -0.18
PDX1P52945 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.92□□□□□ -0.18
PDX1P52945 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.92□□□□□ -0.18
PDX1P52945 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.92□□□□□ -0.18
PDX1P52945 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PDX1P52945 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.92□□□□□ -0.18
PDX1P52945 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PDX1P52945 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 AC139712.1-201ENST00000378256 1875 ntBASIC13.91□□□□□ -0.18
PDX1P52945 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.91□□□□□ -0.18
PDX1P52945 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.91□□□□□ -0.18
PDX1P52945 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 ORAOV1P1-201ENST00000503108 395 ntBASIC13.91□□□□□ -0.18
PDX1P52945 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.91□□□□□ -0.18
PDX1P52945 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.91□□□□□ -0.18
PDX1P52945 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 AC073911.3-201ENST00000624401 631 ntBASIC13.91□□□□□ -0.18
PDX1P52945 AL161773.1-201ENST00000624845 863 ntBASIC13.91□□□□□ -0.18
PDX1P52945 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 LINC01230-201ENST00000625222 3017 ntBASIC13.91□□□□□ -0.18
PDX1P52945 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PDX1P52945 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.91□□□□□ -0.18
PDX1P52945 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PDX1P52945 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms