Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.73□□□□□ -0.37
LHX2P50458 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LHX2P50458 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LHX2P50458 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.72□□□□□ -0.37
LHX2P50458 TEKT4P2-202ENST00000559466 1312 ntBASIC12.72□□□□□ -0.37
LHX2P50458 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
LHX2P50458 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
LHX2P50458 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 ORAOV1P1-201ENST00000503108 395 ntBASIC12.72□□□□□ -0.37
LHX2P50458 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.72□□□□□ -0.37
LHX2P50458 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.72□□□□□ -0.37
LHX2P50458 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.72□□□□□ -0.37
LHX2P50458 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.72□□□□□ -0.37
LHX2P50458 RN7SL455P-201ENST00000580629 282 ntBASIC12.72□□□□□ -0.37
LHX2P50458 AC009145.4-201ENST00000625119 1294 ntBASIC12.72□□□□□ -0.37
LHX2P50458 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.72□□□□□ -0.37
LHX2P50458 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LHX2P50458 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LHX2P50458 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.71□□□□□ -0.37
LHX2P50458 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
LHX2P50458 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 GRK6P1-201ENST00000400595 1711 ntBASIC12.71□□□□□ -0.37
LHX2P50458 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LHX2P50458 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.71□□□□□ -0.37
LHX2P50458 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 PPP1R2P4-201ENST00000424051 595 ntBASIC12.71□□□□□ -0.37
LHX2P50458 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.71□□□□□ -0.37
LHX2P50458 AL512306.1-201ENST00000432698 848 ntBASIC12.71□□□□□ -0.37
LHX2P50458 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.71□□□□□ -0.37
LHX2P50458 AC069218.1-201ENST00000435269 762 ntBASIC12.71□□□□□ -0.37
LHX2P50458 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.71□□□□□ -0.37
LHX2P50458 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.71□□□□□ -0.37
LHX2P50458 MRPL22P1-201ENST00000505398 616 ntBASIC12.71□□□□□ -0.37
LHX2P50458 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
LHX2P50458 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
LHX2P50458 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.71□□□□□ -0.37
LHX2P50458 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 MIR4706-201ENST00000582134 82 ntBASIC12.71□□□□□ -0.37
LHX2P50458 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.71□□□□□ -0.37
LHX2P50458 SIGLEC22P-201ENST00000599104 714 ntBASIC12.71□□□□□ -0.37
LHX2P50458 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.71□□□□□ -0.37
LHX2P50458 AC242376.2-201ENST00000619355 883 ntBASIC12.71□□□□□ -0.37
LHX2P50458 AC005089.1-201ENST00000619486 2241 ntBASIC12.71□□□□□ -0.37
LHX2P50458 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LHX2P50458 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms