Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.15■□□□□ 0.02
BRCC3P46736 AL354861.1-201ENST00000445213 355 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 SCARNA12-201ENST00000459155 270 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 CHCHD2P2-201ENST00000503744 321 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 OR5BD1P-201ENST00000532527 817 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.15■□□□□ 0.02
BRCC3P46736 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.15■□□□□ 0.02
BRCC3P46736 NUDT4P2-201ENST00000578341 546 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 RN7SL455P-201ENST00000580629 282 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.15■□□□□ 0.02
BRCC3P46736 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 AP001065.2-201ENST00000617205 644 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 MIR6858-201ENST00000620733 67 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 MIR600HG-201ENST00000449175 5984 ntBASIC15.15■□□□□ 0.02
BRCC3P46736 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BRCC3P46736 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BRCC3P46736 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.14■□□□□ 0.01
BRCC3P46736 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BRCC3P46736 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BRCC3P46736 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 AC103592.1-201ENST00000394513 664 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BRCC3P46736 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.14■□□□□ 0.01
BRCC3P46736 AC018638.5-201ENST00000450885 754 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 AC018463.1-201ENST00000456674 917 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.14■□□□□ 0.01
BRCC3P46736 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.14■□□□□ 0.01
BRCC3P46736 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.14■□□□□ 0.01
BRCC3P46736 AC007952.4-201ENST00000573866 637 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 RN7SL470P-201ENST00000583069 259 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 LINC02486-201ENST00000604157 3000 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 CICP16-201ENST00000502609 2813 ntBASIC15.14■□□□□ 0.01
BRCC3P46736 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BRCC3P46736 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.14■□□□□ 0.01
BRCC3P46736 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BRCC3P46736 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.14■□□□□ 0.01
BRCC3P46736 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.13■□□□□ 0.01
BRCC3P46736 BX640514.1-201ENST00000583223 1918 ntBASIC15.13■□□□□ 0.01
BRCC3P46736 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRCC3P46736 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.13■□□□□ 0.01
BRCC3P46736 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.13■□□□□ 0.01
BRCC3P46736 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRCC3P46736 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BRCC3P46736 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BRCC3P46736 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms