Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
MTHFRP42898 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 AL591122.2-201ENST00000624125 1853 ntBASIC14.95□□□□□ -0.02
MTHFRP42898 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
MTHFRP42898 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MTHFRP42898 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MTHFRP42898 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MTHFRP42898 AC006504.5-208ENST00000588784 2401 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MTHFRP42898 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MTHFRP42898 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 AC006987.1-201ENST00000413610 527 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.94□□□□□ -0.02
MTHFRP42898 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.94□□□□□ -0.02
MTHFRP42898 AC008026.2-201ENST00000495438 348 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.94□□□□□ -0.02
MTHFRP42898 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.94□□□□□ -0.02
MTHFRP42898 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.94□□□□□ -0.02
MTHFRP42898 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
MTHFRP42898 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.94□□□□□ -0.02
MTHFRP42898 AC006483.2-201ENST00000609813 515 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 AC018695.6-201ENST00000614011 534 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.94□□□□□ -0.02
MTHFRP42898 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 SBF1P1-201ENST00000444527 5631 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 AC015688.4-201ENST00000580780 1647 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MTHFRP42898 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.94□□□□□ -0.02
MTHFRP42898 LAP3P2-201ENST00000454686 1454 ntBASIC14.94□□□□□ -0.02
MTHFRP42898 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MTHFRP42898 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MTHFRP42898 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.93□□□□□ -0.02
MTHFRP42898 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.93□□□□□ -0.02
MTHFRP42898 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.93□□□□□ -0.02
MTHFRP42898 AC145285.5-201ENST00000562217 361 ntBASIC14.93□□□□□ -0.02
MTHFRP42898 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.93□□□□□ -0.02
MTHFRP42898 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.93□□□□□ -0.02
MTHFRP42898 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MTHFRP42898 AC006548.2-201ENST00000605217 529 ntBASIC14.93□□□□□ -0.02
MTHFRP42898 AC012073.1-201ENST00000606114 1108 ntBASIC14.93□□□□□ -0.02
MTHFRP42898 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MTHFRP42898 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.93□□□□□ -0.02
MTHFRP42898 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms