Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 NF1P11-201ENST00000621292 1282 ntBASIC20.72■□□□□ 0.91
KDM5CP41229 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
KDM5CP41229 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC20.72■□□□□ 0.91
KDM5CP41229 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
KDM5CP41229 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.72■□□□□ 0.91
KDM5CP41229 AC011477.7-201ENST00000617163 1440 ntBASIC20.72■□□□□ 0.91
KDM5CP41229 AC089987.1-201ENST00000551654 2209 ntBASIC20.72■□□□□ 0.91
KDM5CP41229 PTN-202ENST00000393083 1599 ntTSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
KDM5CP41229 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 BX640514.1-201ENST00000583223 1918 ntBASIC20.72■□□□□ 0.91
KDM5CP41229 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 RBP4-203ENST00000371469 814 ntTSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC20.72■□□□□ 0.91
KDM5CP41229 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC20.72■□□□□ 0.91
KDM5CP41229 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 IFNL3P1-201ENST00000595082 501 ntBASIC20.72■□□□□ 0.91
KDM5CP41229 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC20.72■□□□□ 0.91
KDM5CP41229 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC20.72■□□□□ 0.91
KDM5CP41229 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KDM5CP41229 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC20.71■□□□□ 0.91
KDM5CP41229 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC20.71■□□□□ 0.91
KDM5CP41229 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC20.71■□□□□ 0.91
KDM5CP41229 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC20.71■□□□□ 0.91
KDM5CP41229 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC20.71■□□□□ 0.91
KDM5CP41229 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC20.71■□□□□ 0.91
KDM5CP41229 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC20.71■□□□□ 0.91
KDM5CP41229 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
KDM5CP41229 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC20.71■□□□□ 0.91
KDM5CP41229 RPL29P2-202ENST00000498671 657 ntBASIC20.71■□□□□ 0.91
KDM5CP41229 PHBP18-201ENST00000546648 813 ntBASIC20.71■□□□□ 0.91
KDM5CP41229 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC20.71■□□□□ 0.91
KDM5CP41229 MIR6893-201ENST00000613458 69 ntBASIC20.71■□□□□ 0.91
KDM5CP41229 MIR6125-201ENST00000618986 96 ntBASIC20.71■□□□□ 0.91
KDM5CP41229 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC20.71■□□□□ 0.91
KDM5CP41229 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KDM5CP41229 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
KDM5CP41229 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.7■□□□□ 0.91
KDM5CP41229 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
KDM5CP41229 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 HLA-W-207ENST00000439514 771 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 AC053503.3-201ENST00000448375 114 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 AC007679.1-201ENST00000458609 502 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 RNA5SP288-201ENST00000516075 93 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC20.7■□□□□ 0.9
KDM5CP41229 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC20.7■□□□□ 0.9
KDM5CP41229 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC20.7■□□□□ 0.9
KDM5CP41229 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC20.7■□□□□ 0.9
KDM5CP41229 CLPP-205ENST00000596605 646 ntTSL 2 BASIC20.7■□□□□ 0.9
KDM5CP41229 SNX20-205ENST00000610485 557 ntTSL 5 BASIC20.7■□□□□ 0.9
KDM5CP41229 AL512324.3-201ENST00000619383 882 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 AC024075.2-201ENST00000598112 1473 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
KDM5CP41229 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KDM5CP41229 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC20.7■□□□□ 0.9
KDM5CP41229 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC20.7■□□□□ 0.9
KDM5CP41229 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KDM5CP41229 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.7■□□□□ 0.9
KDM5CP41229 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KDM5CP41229 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
KDM5CP41229 AC097359.2-201ENST00000604992 2389 ntBASIC20.7■□□□□ 0.9
KDM5CP41229 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC20.7■□□□□ 0.9
KDM5CP41229 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KDM5CP41229 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDM5CP41229 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDM5CP41229 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KDM5CP41229 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.69■□□□□ 0.9
KDM5CP41229 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms