Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.33□□□□□ -0.44
CD40P25942 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 LINC00115-201ENST00000473798 1317 ntBASIC12.33□□□□□ -0.44
CD40P25942 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CD40P25942 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD40P25942 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CD40P25942 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 MIR645-201ENST00000385283 94 ntBASIC12.32□□□□□ -0.44
CD40P25942 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 FXNP2-201ENST00000411625 547 ntBASIC12.32□□□□□ -0.44
CD40P25942 AC006987.1-201ENST00000413610 527 ntBASIC12.32□□□□□ -0.44
CD40P25942 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.32□□□□□ -0.44
CD40P25942 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.32□□□□□ -0.44
CD40P25942 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 NDUFS6P1-201ENST00000485187 316 ntBASIC12.32□□□□□ -0.44
CD40P25942 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.32□□□□□ -0.44
CD40P25942 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.32□□□□□ -0.44
CD40P25942 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.32□□□□□ -0.44
CD40P25942 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 AC138894.2-201ENST00000602838 371 ntBASIC12.32□□□□□ -0.44
CD40P25942 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.32□□□□□ -0.44
CD40P25942 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 AC007952.5-201ENST00000572818 1486 ntBASIC12.32□□□□□ -0.44
CD40P25942 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CD40P25942 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD40P25942 AL022313.4-201ENST00000562756 2046 ntBASIC12.32□□□□□ -0.44
CD40P25942 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.32□□□□□ -0.44
CD40P25942 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.32□□□□□ -0.44
CD40P25942 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 LINC00552-201ENST00000625151 2579 ntBASIC12.31□□□□□ -0.44
CD40P25942 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CD40P25942 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD40P25942 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CD40P25942 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms