Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.43□□□□□ -0.26
NR4A1P22736 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NR4A1P22736 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.43□□□□□ -0.26
NR4A1P22736 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 AC063926.2-201ENST00000623766 1308 ntBASIC13.42□□□□□ -0.26
NR4A1P22736 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 COX5BP8-201ENST00000416911 349 ntBASIC13.42□□□□□ -0.26
NR4A1P22736 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 GAPDHP21-201ENST00000450301 1010 ntBASIC13.42□□□□□ -0.26
NR4A1P22736 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.42□□□□□ -0.26
NR4A1P22736 AC011498.7-201ENST00000624986 2027 ntBASIC13.42□□□□□ -0.26
NR4A1P22736 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NR4A1P22736 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NR4A1P22736 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.42□□□□□ -0.26
NR4A1P22736 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 INTS4P2-202ENST00000614726 2019 ntBASIC13.41□□□□□ -0.26
NR4A1P22736 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
NR4A1P22736 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NR4A1P22736 AC005034.1-201ENST00000426657 489 ntBASIC13.41□□□□□ -0.26
NR4A1P22736 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.41□□□□□ -0.26
NR4A1P22736 VDAC1P7-201ENST00000462417 847 ntBASIC13.41□□□□□ -0.26
NR4A1P22736 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.41□□□□□ -0.26
NR4A1P22736 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms