Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.83□□□□□ -0.04
CD48P09326 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.83□□□□□ -0.04
CD48P09326 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.83□□□□□ -0.04
CD48P09326 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.83□□□□□ -0.04
CD48P09326 AL023803.2-201ENST00000620080 638 ntBASIC14.83□□□□□ -0.04
CD48P09326 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.83□□□□□ -0.04
CD48P09326 AC068587.8-201ENST00000641239 219 ntBASIC14.83□□□□□ -0.04
CD48P09326 AC004923.1-202ENST00000642106 209 ntBASIC14.83□□□□□ -0.04
CD48P09326 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 AHCYP4-201ENST00000419201 1315 ntBASIC14.83□□□□□ -0.04
CD48P09326 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CD48P09326 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.83□□□□□ -0.04
CD48P09326 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD48P09326 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 NCLP1-201ENST00000445357 1963 ntBASIC14.82□□□□□ -0.04
CD48P09326 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 AGAP12P-201ENST00000585227 2359 ntBASIC14.82□□□□□ -0.04
CD48P09326 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CD48P09326 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CD48P09326 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.82□□□□□ -0.04
CD48P09326 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CD48P09326 KRT18P15-201ENST00000458108 1291 ntBASIC14.82□□□□□ -0.04
CD48P09326 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.82□□□□□ -0.04
CD48P09326 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.82□□□□□ -0.04
CD48P09326 SNORD3B-2-202ENST00000571722 791 ntBASIC14.82□□□□□ -0.04
CD48P09326 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.82□□□□□ -0.04
CD48P09326 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.82□□□□□ -0.04
CD48P09326 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.82□□□□□ -0.04
CD48P09326 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.82□□□□□ -0.04
CD48P09326 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.82□□□□□ -0.04
CD48P09326 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CD48P09326 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.82□□□□□ -0.04
CD48P09326 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD48P09326 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.81□□□□□ -0.04
CD48P09326 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CD48P09326 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.81□□□□□ -0.04
CD48P09326 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD48P09326 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms