Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRT6AP02538 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.96□□□□□ -0.17
KRT6AP02538 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
KRT6AP02538 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.96□□□□□ -0.18
KRT6AP02538 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.96□□□□□ -0.18
KRT6AP02538 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.96□□□□□ -0.18
KRT6AP02538 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
KRT6AP02538 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.96□□□□□ -0.18
KRT6AP02538 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.96□□□□□ -0.18
KRT6AP02538 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
KRT6AP02538 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
KRT6AP02538 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KRT6AP02538 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 AGAP10P-201ENST00000454844 2418 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 TMBIM7P-202ENST00000641474 1516 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KRT6AP02538 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 BOLA2P3-201ENST00000404566 256 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT6AP02538 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT6AP02538 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 RBM8B-201ENST00000555532 525 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT6AP02538 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT6AP02538 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.95□□□□□ -0.18
KRT6AP02538 MIR6720-201ENST00000611664 98 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 BAP1-211ENST00000615113 489 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT6AP02538 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.95□□□□□ -0.18
KRT6AP02538 AC099521.3-201ENST00000624251 2938 ntBASIC13.95□□□□□ -0.18
KRT6AP02538 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
KRT6AP02538 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.95□□□□□ -0.18
KRT6AP02538 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KRT6AP02538 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRT6AP02538 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT6AP02538 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.94□□□□□ -0.18
KRT6AP02538 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KRT6AP02538 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.94□□□□□ -0.18
KRT6AP02538 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.94□□□□□ -0.18
KRT6AP02538 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
KRT6AP02538 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms