Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.58■■□□□ 1.84
SNCAIPQ9Y6H5 AL161729.1-201ENST00000604104 1402 ntBASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNCAIPQ9Y6H5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
SNCAIPQ9Y6H5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 MIR6084-201ENST00000622012 110 ntBASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 AL358852.1-201ENST00000623174 1268 ntBASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNCAIPQ9Y6H5 AC141586.4-201ENST00000624558 1573 ntBASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 HLA-L-211ENST00000482052 1765 ntBASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 AC123595.1-201ENST00000440769 1046 ntBASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 IGHV3-19-201ENST00000521488 291 ntBASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SNCAIPQ9Y6H5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNCAIPQ9Y6H5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.52■■□□□ 1.84
SNCAIPQ9Y6H5 ALDH1A3-203ENST00000557963 1670 ntBASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 MIR572-201ENST00000384983 95 ntBASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNCAIPQ9Y6H5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 AC012414.1-201ENST00000556676 535 ntBASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
SNCAIPQ9Y6H5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.49■■□□□ 1.83
SNCAIPQ9Y6H5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 AC004911.1-201ENST00000416316 871 ntBASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNCAIPQ9Y6H5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.47■■□□□ 1.83
SNCAIPQ9Y6H5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNCAIPQ9Y6H5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
SNCAIPQ9Y6H5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.47■■□□□ 1.83
SNCAIPQ9Y6H5 CCDC92B-201ENST00000575506 885 ntBASIC26.47■■□□□ 1.83
SNCAIPQ9Y6H5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.47■■□□□ 1.83
SNCAIPQ9Y6H5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms