Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DUX4L2-201ENST00000561772 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 IKBKGP1-201ENST00000612193 1073 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4L6-201ENST00000626483 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4L1-201ENST00000627662 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4L8-201ENST00000629013 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4L3-201ENST00000630187 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4L7-201ENST00000630678 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 DUX4L5-201ENST00000630834 1275 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 KRT18P5-201ENST00000436075 1291 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 AC012414.1-201ENST00000556676 535 ntBASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.1■■□□□ 1.61
SCN10AQ9Y5Y9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.1■■□□□ 1.61
SCN10AQ9Y5Y9 TSPY26P-201ENST00000476365 1326 ntBASIC25.1■■□□□ 1.61
SCN10AQ9Y5Y9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 YBX1P1-201ENST00000445822 960 ntBASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.09■■□□□ 1.61
SCN10AQ9Y5Y9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.08■■□□□ 1.61
SCN10AQ9Y5Y9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCN10AQ9Y5Y9 AC141586.4-201ENST00000624558 1573 ntBASIC25.08■■□□□ 1.61
SCN10AQ9Y5Y9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCN10AQ9Y5Y9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 IGHV3-19-201ENST00000521488 291 ntBASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SCN10AQ9Y5Y9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 MIR572-201ENST00000384983 95 ntBASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCN10AQ9Y5Y9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 AC090192.1-201ENST00000517740 490 ntBASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.05■■□□□ 1.6
SCN10AQ9Y5Y9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 AL358852.1-201ENST00000623174 1268 ntBASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.04■■□□□ 1.6
SCN10AQ9Y5Y9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCN10AQ9Y5Y9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.03■■□□□ 1.6
SCN10AQ9Y5Y9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.03■■□□□ 1.6
SCN10AQ9Y5Y9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.03■■□□□ 1.6
SCN10AQ9Y5Y9 AC092437.1-201ENST00000624794 1048 ntBASIC25.03■■□□□ 1.6
SCN10AQ9Y5Y9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.03■■□□□ 1.6
SCN10AQ9Y5Y9 AC123595.1-201ENST00000440769 1046 ntBASIC25.02■■□□□ 1.6
SCN10AQ9Y5Y9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.02■■□□□ 1.6
SCN10AQ9Y5Y9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SCN10AQ9Y5Y9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.02■■□□□ 1.6
SCN10AQ9Y5Y9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCN10AQ9Y5Y9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCN10AQ9Y5Y9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SCN10AQ9Y5Y9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
SCN10AQ9Y5Y9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
SCN10AQ9Y5Y9 AC010525.1-201ENST00000585559 441 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms