Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA9Q9UGM1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA9Q9UGM1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA9Q9UGM1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRNA9Q9UGM1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 MTDHP2-201ENST00000601468 714 ntBASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHRNA9Q9UGM1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRNA9Q9UGM1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CHRNA9Q9UGM1 C9orf163-202ENST00000624034 2573 ntBASIC20.58■□□□□ 0.88
CHRNA9Q9UGM1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 TSPY9P-201ENST00000440215 945 ntBASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 TSPY11P-201ENST00000442607 1045 ntBASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRNA9Q9UGM1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 ANOS2P-203ENST00000472227 1816 ntBASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNA9Q9UGM1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 AC010997.5-201ENST00000609182 354 ntBASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNA9Q9UGM1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 GUSBP5-201ENST00000418136 578 ntBASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNA9Q9UGM1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 AC005703.6-201ENST00000623265 1329 ntBASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNA9Q9UGM1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 UNC93B8-201ENST00000511903 705 ntBASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNA9Q9UGM1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms