Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 AL031848.2-201ENST00000607670 837 ntBASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPL39Q9NYK5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.55■□□□□ 0.88
MRPL39Q9NYK5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL39Q9NYK5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MRPL39Q9NYK5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
MRPL39Q9NYK5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
MRPL39Q9NYK5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPL39Q9NYK5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 AC004448.1-201ENST00000458332 883 ntBASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPL39Q9NYK5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 ALDH1A3-203ENST00000557963 1670 ntBASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 AC137630.3-201ENST00000607245 391 ntBASIC20.52■□□□□ 0.88
MRPL39Q9NYK5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MRPL39Q9NYK5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MRPL39Q9NYK5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPL39Q9NYK5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.49■□□□□ 0.87
MRPL39Q9NYK5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms