Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LIN7CQ9NUP9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 RARRES2P1-201ENST00000474487 481 ntBASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 AC011551.1-201ENST00000614101 683 ntBASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.69■□□□□ 0.58
LIN7CQ9NUP9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 AL022069.1-201ENST00000568025 1636 ntBASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 AC233723.2-201ENST00000623798 2106 ntBASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LIN7CQ9NUP9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 KRT18P24-201ENST00000344739 1156 ntBASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LIN7CQ9NUP9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LIN7CQ9NUP9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 AC103724.3-201ENST00000564481 992 ntBASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 THA1P-201ENST00000590384 1145 ntBASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LIN7CQ9NUP9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
LIN7CQ9NUP9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LIN7CQ9NUP9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LIN7CQ9NUP9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIN7CQ9NUP9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIN7CQ9NUP9 AL031848.2-201ENST00000607670 837 ntBASIC18.64■□□□□ 0.57
LIN7CQ9NUP9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIN7CQ9NUP9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.64■□□□□ 0.57
LIN7CQ9NUP9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIN7CQ9NUP9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms