Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.12■□□□□ 0.97
KLHL1Q9NR64 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
KLHL1Q9NR64 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KLHL1Q9NR64 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 MIR6089-201ENST00000616698 64 ntBASIC21.09■□□□□ 0.97
KLHL1Q9NR64 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.09■□□□□ 0.97
KLHL1Q9NR64 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KLHL1Q9NR64 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KLHL1Q9NR64 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KLHL1Q9NR64 AC133561.1-201ENST00000568600 2415 ntBASIC21.08■□□□□ 0.96
KLHL1Q9NR64 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.96
KLHL1Q9NR64 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KLHL1Q9NR64 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.07■□□□□ 0.96
KLHL1Q9NR64 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KLHL1Q9NR64 AC005703.6-201ENST00000623265 1329 ntBASIC21.06■□□□□ 0.96
KLHL1Q9NR64 AC131274.2-201ENST00000580697 1507 ntBASIC21.06■□□□□ 0.96
KLHL1Q9NR64 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
KLHL1Q9NR64 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 MIR935-201ENST00000401179 91 ntBASIC21.05■□□□□ 0.96
KLHL1Q9NR64 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KLHL1Q9NR64 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 SRD5A1P1-201ENST00000442297 786 ntBASIC21.04■□□□□ 0.96
KLHL1Q9NR64 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KLHL1Q9NR64 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KLHL1Q9NR64 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KLHL1Q9NR64 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KLHL1Q9NR64 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.02■□□□□ 0.96
KLHL1Q9NR64 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms