Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CWC22Q9HCG8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CWC22Q9HCG8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CWC22Q9HCG8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.24■■□□□ 1.95
CWC22Q9HCG8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.24■■□□□ 1.95
CWC22Q9HCG8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.24■■□□□ 1.95
CWC22Q9HCG8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.24■■□□□ 1.95
CWC22Q9HCG8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.24■■□□□ 1.95
CWC22Q9HCG8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 MIR3621-201ENST00000580529 85 ntBASIC27.23■■□□□ 1.95
CWC22Q9HCG8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
CWC22Q9HCG8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
CWC22Q9HCG8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CWC22Q9HCG8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.2■■□□□ 1.95
CWC22Q9HCG8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CWC22Q9HCG8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CWC22Q9HCG8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
CWC22Q9HCG8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 AC096631.2-201ENST00000436136 790 ntBASIC27.18■■□□□ 1.94
CWC22Q9HCG8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CWC22Q9HCG8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.17■■□□□ 1.94
CWC22Q9HCG8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CWC22Q9HCG8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms