Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZFYVE28Q9HCC9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZFYVE28Q9HCC9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ZFYVE28Q9HCC9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ZFYVE28Q9HCC9 MIR6089-201ENST00000616698 64 ntBASIC26.14■■□□□ 1.78
ZFYVE28Q9HCC9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ZFYVE28Q9HCC9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.14■■□□□ 1.78
ZFYVE28Q9HCC9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.14■■□□□ 1.77
ZFYVE28Q9HCC9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
ZFYVE28Q9HCC9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
ZFYVE28Q9HCC9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ZFYVE28Q9HCC9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 SLC6A10P-202ENST00000431994 2058 ntBASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 AC080038.1-201ENST00000611274 1154 ntBASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZFYVE28Q9HCC9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZFYVE28Q9HCC9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ZFYVE28Q9HCC9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
ZFYVE28Q9HCC9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
ZFYVE28Q9HCC9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ZFYVE28Q9HCC9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
ZFYVE28Q9HCC9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.07■■□□□ 1.76
ZFYVE28Q9HCC9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.06■■□□□ 1.76
ZFYVE28Q9HCC9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
ZFYVE28Q9HCC9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.06■■□□□ 1.76
ZFYVE28Q9HCC9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ZFYVE28Q9HCC9 AL161729.1-201ENST00000604104 1402 ntBASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 AC133637.1-201ENST00000624115 1537 ntBASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
ZFYVE28Q9HCC9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
ZFYVE28Q9HCC9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms