Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 ECEL1P1-201ENST00000373592 1742 ntBASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.07■□□□□ 0
SND1-IT1Q9HBX3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 AC092068.2-201ENST00000590491 1708 ntBASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 ECEL1P2-201ENST00000461596 1295 ntBASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SND1-IT1Q9HBX3 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.05■□□□□ 0
SND1-IT1Q9HBX3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.05■□□□□ 0
SND1-IT1Q9HBX3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SND1-IT1Q9HBX3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.05■□□□□ 0
SND1-IT1Q9HBX3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SND1-IT1Q9HBX3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.04■□□□□ -0
SND1-IT1Q9HBX3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.03■□□□□ -0
SND1-IT1Q9HBX3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SND1-IT1Q9HBX3 AL024507.2-201ENST00000606070 2574 ntBASIC15.02■□□□□ -0
SND1-IT1Q9HBX3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SND1-IT1Q9HBX3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.02■□□□□ -0
SND1-IT1Q9HBX3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SND1-IT1Q9HBX3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SND1-IT1Q9HBX3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SND1-IT1Q9HBX3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.02□□□□□ -0.01
SND1-IT1Q9HBX3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SND1-IT1Q9HBX3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SND1-IT1Q9HBX3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms