Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP1R3EQ9H7J1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PPP1R3EQ9H7J1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP1R3EQ9H7J1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP1R3EQ9H7J1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP1R3EQ9H7J1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 AC092068.2-201ENST00000590491 1708 ntBASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 TSPY13P-201ENST00000338964 914 ntBASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 AC139795.1-202ENST00000500444 432 ntBASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP1R3EQ9H7J1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 AL592295.1-201ENST00000400984 884 ntBASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 AC010980.1-201ENST00000587192 1142 ntBASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 BHLHE23-202ENST00000612929 1109 ntBASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PPP1R3EQ9H7J1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 AC090877.2-201ENST00000558441 1738 ntBASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 AC012354.3-201ENST00000623734 483 ntBASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PPP1R3EQ9H7J1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PPP1R3EQ9H7J1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 AL137060.1-201ENST00000618151 2648 ntBASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PPP1R3EQ9H7J1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PPP1R3EQ9H7J1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PPP1R3EQ9H7J1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPP1R3EQ9H7J1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
PPP1R3EQ9H7J1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPP1R3EQ9H7J1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PPP1R3EQ9H7J1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms