Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 MIR6089-201ENST00000616698 64 ntBASIC21.77■■□□□ 1.08
SOX17Q9H6I2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SOX17Q9H6I2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 AL356740.2-201ENST00000601559 647 ntBASIC21.76■■□□□ 1.07
SOX17Q9H6I2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 AC131281.2-201ENST00000520478 145 ntBASIC21.75■■□□□ 1.07
SOX17Q9H6I2 MIR3621-201ENST00000580529 85 ntBASIC21.75■■□□□ 1.07
SOX17Q9H6I2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.75■■□□□ 1.07
SOX17Q9H6I2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms