Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX17Q9H6I2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX17Q9H6I2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX17Q9H6I2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 MIR6089-201ENST00000616698 64 ntBASIC21.77■■□□□ 1.08
SOX17Q9H6I2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX17Q9H6I2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SOX17Q9H6I2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 AL356740.2-201ENST00000601559 647 ntBASIC21.76■■□□□ 1.07
SOX17Q9H6I2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SOX17Q9H6I2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 AC131281.2-201ENST00000520478 145 ntBASIC21.75■■□□□ 1.07
SOX17Q9H6I2 MIR3621-201ENST00000580529 85 ntBASIC21.75■■□□□ 1.07
SOX17Q9H6I2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.75■■□□□ 1.07
SOX17Q9H6I2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX17Q9H6I2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX17Q9H6I2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX17Q9H6I2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SOX17Q9H6I2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms