Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS11Q9H270 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
VPS11Q9H270 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS11Q9H270 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS11Q9H270 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS11Q9H270 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS11Q9H270 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS11Q9H270 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS11Q9H270 KRT18P60-201ENST00000312876 1297 ntBASIC22.65■■□□□ 1.22
VPS11Q9H270 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS11Q9H270 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS11Q9H270 HSD17B1P1-201ENST00000590052 955 ntBASIC22.65■■□□□ 1.22
VPS11Q9H270 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS11Q9H270 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS11Q9H270 AC137767.1-201ENST00000602918 1920 ntBASIC22.65■■□□□ 1.22
VPS11Q9H270 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.64■■□□□ 1.22
VPS11Q9H270 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS11Q9H270 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS11Q9H270 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS11Q9H270 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.64■■□□□ 1.21
VPS11Q9H270 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.64■■□□□ 1.21
VPS11Q9H270 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
VPS11Q9H270 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS11Q9H270 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
VPS11Q9H270 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS11Q9H270 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS11Q9H270 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS11Q9H270 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VPS11Q9H270 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS11Q9H270 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VPS11Q9H270 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS11Q9H270 AC011551.1-201ENST00000614101 683 ntBASIC22.62■■□□□ 1.21
VPS11Q9H270 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
VPS11Q9H270 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.62■■□□□ 1.21
VPS11Q9H270 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS11Q9H270 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS11Q9H270 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS11Q9H270 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
VPS11Q9H270 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS11Q9H270 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS11Q9H270 AC131274.2-201ENST00000580697 1507 ntBASIC22.61■■□□□ 1.21
VPS11Q9H270 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.61■■□□□ 1.21
VPS11Q9H270 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS11Q9H270 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
VPS11Q9H270 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.6■■□□□ 1.21
VPS11Q9H270 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.6■■□□□ 1.21
VPS11Q9H270 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
VPS11Q9H270 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
VPS11Q9H270 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS11Q9H270 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
VPS11Q9H270 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
VPS11Q9H270 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS11Q9H270 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS11Q9H270 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS11Q9H270 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS11Q9H270 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
VPS11Q9H270 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS11Q9H270 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS11Q9H270 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS11Q9H270 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS11Q9H270 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS11Q9H270 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS11Q9H270 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.58■■□□□ 1.21
VPS11Q9H270 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.58■■□□□ 1.21
VPS11Q9H270 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS11Q9H270 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
VPS11Q9H270 AC139795.1-202ENST00000500444 432 ntBASIC22.58■■□□□ 1.21
VPS11Q9H270 DUX4L18-201ENST00000553347 1267 ntBASIC22.58■■□□□ 1.21
VPS11Q9H270 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VPS11Q9H270 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
VPS11Q9H270 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms