Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALX4Q9H161 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
ALX4Q9H161 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.04■□□□□ 0.64
ALX4Q9H161 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.04■□□□□ 0.64
ALX4Q9H161 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALX4Q9H161 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALX4Q9H161 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ALX4Q9H161 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.03■□□□□ 0.64
ALX4Q9H161 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.03■□□□□ 0.64
ALX4Q9H161 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALX4Q9H161 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALX4Q9H161 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.03■□□□□ 0.64
ALX4Q9H161 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.03■□□□□ 0.64
ALX4Q9H161 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.03■□□□□ 0.64
ALX4Q9H161 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ALX4Q9H161 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ALX4Q9H161 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ALX4Q9H161 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.02■□□□□ 0.64
ALX4Q9H161 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALX4Q9H161 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALX4Q9H161 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.02■□□□□ 0.64
ALX4Q9H161 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALX4Q9H161 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ALX4Q9H161 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
ALX4Q9H161 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.02■□□□□ 0.64
ALX4Q9H161 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALX4Q9H161 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALX4Q9H161 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.02■□□□□ 0.64
ALX4Q9H161 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.02■□□□□ 0.64
ALX4Q9H161 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ALX4Q9H161 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ALX4Q9H161 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.01■□□□□ 0.63
ALX4Q9H161 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 AC025884.2-201ENST00000553429 711 ntBASIC19.01■□□□□ 0.63
ALX4Q9H161 AC007029.1-201ENST00000604183 313 ntBASIC19.01■□□□□ 0.63
ALX4Q9H161 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ALX4Q9H161 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.01■□□□□ 0.63
ALX4Q9H161 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.01■□□□□ 0.63
ALX4Q9H161 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19■□□□□ 0.63
ALX4Q9H161 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19■□□□□ 0.63
ALX4Q9H161 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19■□□□□ 0.63
ALX4Q9H161 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19■□□□□ 0.63
ALX4Q9H161 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19■□□□□ 0.63
ALX4Q9H161 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ALX4Q9H161 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19■□□□□ 0.63
ALX4Q9H161 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALX4Q9H161 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.99■□□□□ 0.63
ALX4Q9H161 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.99■□□□□ 0.63
ALX4Q9H161 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.99■□□□□ 0.63
ALX4Q9H161 U85056.1-201ENST00000616429 682 ntBASIC18.99■□□□□ 0.63
ALX4Q9H161 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ALX4Q9H161 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALX4Q9H161 SLC25A24-204ENST00000569674 2357 ntBASIC18.99■□□□□ 0.63
ALX4Q9H161 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ALX4Q9H161 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ALX4Q9H161 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.99■□□□□ 0.63
ALX4Q9H161 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.98■□□□□ 0.63
ALX4Q9H161 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ALX4Q9H161 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.98■□□□□ 0.63
ALX4Q9H161 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.98■□□□□ 0.63
ALX4Q9H161 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.98■□□□□ 0.63
ALX4Q9H161 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ALX4Q9H161 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ALX4Q9H161 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.97■□□□□ 0.63
ALX4Q9H161 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
ALX4Q9H161 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.97■□□□□ 0.63
ALX4Q9H161 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.97■□□□□ 0.63
ALX4Q9H161 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ALX4Q9H161 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ALX4Q9H161 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ALX4Q9H161 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.96■□□□□ 0.63
ALX4Q9H161 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms