Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.9■□□□□ 0.94
RSPO3Q9BXY4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.9■□□□□ 0.94
RSPO3Q9BXY4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RSPO3Q9BXY4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RSPO3Q9BXY4 AC233723.2-201ENST00000623798 2106 ntBASIC20.89■□□□□ 0.94
RSPO3Q9BXY4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RSPO3Q9BXY4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RSPO3Q9BXY4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RSPO3Q9BXY4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.89■□□□□ 0.93
RSPO3Q9BXY4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RSPO3Q9BXY4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RSPO3Q9BXY4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 AC079630.1-202ENST00000618127 1840 ntBASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 AC103724.3-201ENST00000564481 992 ntBASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RSPO3Q9BXY4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RSPO3Q9BXY4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 AL117328.2-201ENST00000624617 1940 ntBASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RSPO3Q9BXY4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
RSPO3Q9BXY4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 KRT8P33-201ENST00000508125 1423 ntBASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RSPO3Q9BXY4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RSPO3Q9BXY4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.83■□□□□ 0.93
RSPO3Q9BXY4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RSPO3Q9BXY4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.83■□□□□ 0.92
RSPO3Q9BXY4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RSPO3Q9BXY4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RSPO3Q9BXY4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RSPO3Q9BXY4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 SNX5-217ENST00000606557 1087 ntBASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.81■□□□□ 0.92
RSPO3Q9BXY4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RSPO3Q9BXY4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RSPO3Q9BXY4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.8■□□□□ 0.92
RSPO3Q9BXY4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms