Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VRK1Q99986 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VRK1Q99986 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VRK1Q99986 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.74■□□□□ 0.75
VRK1Q99986 SLC6A10P-202ENST00000431994 2058 ntBASIC19.74■□□□□ 0.75
VRK1Q99986 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.74■□□□□ 0.75
VRK1Q99986 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.74■□□□□ 0.75
VRK1Q99986 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.74■□□□□ 0.75
VRK1Q99986 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.74■□□□□ 0.75
VRK1Q99986 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VRK1Q99986 AC141586.4-201ENST00000624558 1573 ntBASIC19.74■□□□□ 0.75
VRK1Q99986 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
VRK1Q99986 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VRK1Q99986 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.73■□□□□ 0.75
VRK1Q99986 MIR3621-201ENST00000580529 85 ntBASIC19.73■□□□□ 0.75
VRK1Q99986 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.73■□□□□ 0.75
VRK1Q99986 SNX5-217ENST00000606557 1087 ntBASIC19.73■□□□□ 0.75
VRK1Q99986 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VRK1Q99986 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.72■□□□□ 0.75
VRK1Q99986 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 AL136116.3-201ENST00000402907 1138 ntBASIC19.72■□□□□ 0.75
VRK1Q99986 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 AC131281.2-201ENST00000520478 145 ntBASIC19.72■□□□□ 0.75
VRK1Q99986 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.72■□□□□ 0.75
VRK1Q99986 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.72■□□□□ 0.75
VRK1Q99986 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK1Q99986 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.72■□□□□ 0.75
VRK1Q99986 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VRK1Q99986 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK1Q99986 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.71■□□□□ 0.75
VRK1Q99986 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
VRK1Q99986 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK1Q99986 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VRK1Q99986 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.7■□□□□ 0.74
VRK1Q99986 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.7■□□□□ 0.74
VRK1Q99986 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VRK1Q99986 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK1Q99986 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.7■□□□□ 0.74
VRK1Q99986 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
VRK1Q99986 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
VRK1Q99986 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.7■□□□□ 0.74
VRK1Q99986 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.7■□□□□ 0.74
VRK1Q99986 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VRK1Q99986 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK1Q99986 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK1Q99986 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK1Q99986 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VRK1Q99986 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK1Q99986 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.69■□□□□ 0.74
VRK1Q99986 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK1Q99986 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
VRK1Q99986 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK1Q99986 AC019069.1-201ENST00000610008 1333 ntBASIC19.69■□□□□ 0.74
VRK1Q99986 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VRK1Q99986 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.69■□□□□ 0.74
VRK1Q99986 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK1Q99986 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VRK1Q99986 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.68■□□□□ 0.74
VRK1Q99986 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VRK1Q99986 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VRK1Q99986 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VRK1Q99986 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VRK1Q99986 MIR6722-201ENST00000617286 78 ntBASIC19.68■□□□□ 0.74
VRK1Q99986 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK1Q99986 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms