Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
S1PR3Q99500 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
S1PR3Q99500 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
S1PR3Q99500 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
S1PR3Q99500 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
S1PR3Q99500 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.55■□□□□ 0.56
S1PR3Q99500 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
S1PR3Q99500 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.55■□□□□ 0.56
S1PR3Q99500 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
S1PR3Q99500 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
S1PR3Q99500 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
S1PR3Q99500 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
S1PR3Q99500 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.54■□□□□ 0.56
S1PR3Q99500 ANOS2P-203ENST00000472227 1816 ntBASIC18.54■□□□□ 0.56
S1PR3Q99500 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.54■□□□□ 0.56
S1PR3Q99500 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.54■□□□□ 0.56
S1PR3Q99500 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.54■□□□□ 0.56
S1PR3Q99500 AC004448.1-201ENST00000458332 883 ntBASIC18.54■□□□□ 0.56
S1PR3Q99500 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.54■□□□□ 0.56
S1PR3Q99500 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
S1PR3Q99500 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
S1PR3Q99500 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
S1PR3Q99500 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.54■□□□□ 0.56
S1PR3Q99500 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
S1PR3Q99500 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.54■□□□□ 0.56
S1PR3Q99500 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
S1PR3Q99500 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
S1PR3Q99500 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.53■□□□□ 0.56
S1PR3Q99500 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
S1PR3Q99500 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.53■□□□□ 0.56
S1PR3Q99500 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
S1PR3Q99500 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
S1PR3Q99500 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
S1PR3Q99500 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
S1PR3Q99500 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
S1PR3Q99500 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.52■□□□□ 0.56
S1PR3Q99500 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
S1PR3Q99500 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
S1PR3Q99500 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.52■□□□□ 0.56
S1PR3Q99500 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
S1PR3Q99500 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.51■□□□□ 0.55
S1PR3Q99500 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.51■□□□□ 0.55
S1PR3Q99500 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
S1PR3Q99500 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
S1PR3Q99500 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
S1PR3Q99500 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.51■□□□□ 0.55
S1PR3Q99500 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
S1PR3Q99500 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.51■□□□□ 0.55
S1PR3Q99500 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.51■□□□□ 0.55
S1PR3Q99500 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
S1PR3Q99500 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
S1PR3Q99500 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
S1PR3Q99500 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
S1PR3Q99500 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.5■□□□□ 0.55
S1PR3Q99500 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
S1PR3Q99500 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
S1PR3Q99500 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.49■□□□□ 0.55
S1PR3Q99500 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
S1PR3Q99500 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
S1PR3Q99500 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
S1PR3Q99500 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
S1PR3Q99500 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
S1PR3Q99500 AL451085.2-201ENST00000605085 799 ntBASIC18.49■□□□□ 0.55
S1PR3Q99500 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
S1PR3Q99500 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
S1PR3Q99500 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.49■□□□□ 0.55
S1PR3Q99500 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
S1PR3Q99500 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.49■□□□□ 0.55
S1PR3Q99500 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.49■□□□□ 0.55
S1PR3Q99500 AC092068.2-201ENST00000590491 1708 ntBASIC18.49■□□□□ 0.55
S1PR3Q99500 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
S1PR3Q99500 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
S1PR3Q99500 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
S1PR3Q99500 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
S1PR3Q99500 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
S1PR3Q99500 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
S1PR3Q99500 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
S1PR3Q99500 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms