Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF48Q96MX3 C17orf82-201ENST00000623772 1530 ntBASIC18.36■□□□□ 0.53
ZNF48Q96MX3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF48Q96MX3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF48Q96MX3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF48Q96MX3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF48Q96MX3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF48Q96MX3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF48Q96MX3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 CA15P2-201ENST00000611168 834 ntBASIC18.34■□□□□ 0.53
ZNF48Q96MX3 AC011298.3-201ENST00000615796 283 ntBASIC18.34■□□□□ 0.53
ZNF48Q96MX3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF48Q96MX3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF48Q96MX3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF48Q96MX3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF48Q96MX3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 AC006455.2-201ENST00000429931 906 ntBASIC18.33■□□□□ 0.52
ZNF48Q96MX3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 AC092666.2-201ENST00000613287 246 ntBASIC18.33■□□□□ 0.52
ZNF48Q96MX3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 LINC00543-201ENST00000567234 1845 ntBASIC18.33■□□□□ 0.52
ZNF48Q96MX3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF48Q96MX3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 HLA-L-211ENST00000482052 1765 ntBASIC18.32■□□□□ 0.52
ZNF48Q96MX3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 AL138724.1-201ENST00000606771 1088 ntBASIC18.32■□□□□ 0.52
ZNF48Q96MX3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF48Q96MX3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 RASA4CP-201ENST00000424092 1398 ntBASIC18.31■□□□□ 0.52
ZNF48Q96MX3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 AC008764.7-201ENST00000593779 1081 ntBASIC18.31■□□□□ 0.52
ZNF48Q96MX3 MIR5787-201ENST00000611784 55 ntBASIC18.31■□□□□ 0.52
ZNF48Q96MX3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ZNF48Q96MX3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 LINC01124-201ENST00000409786 2117 ntBASIC18.3■□□□□ 0.52
ZNF48Q96MX3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 AC027682.1-201ENST00000562846 899 ntBASIC18.3■□□□□ 0.52
ZNF48Q96MX3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF48Q96MX3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF48Q96MX3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms