Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CMTM3Q96MX0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 AL022069.1-201ENST00000568025 1636 ntBASIC19.45■□□□□ 0.7
CMTM3Q96MX0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 ECEL1P2-201ENST00000461596 1295 ntBASIC19.45■□□□□ 0.7
CMTM3Q96MX0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CMTM3Q96MX0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 AC139530.1-201ENST00000575312 1977 ntBASIC19.44■□□□□ 0.7
CMTM3Q96MX0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CMTM3Q96MX0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CMTM3Q96MX0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CMTM3Q96MX0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CMTM3Q96MX0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CMTM3Q96MX0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.43■□□□□ 0.7
CMTM3Q96MX0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.43■□□□□ 0.7
CMTM3Q96MX0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CMTM3Q96MX0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CMTM3Q96MX0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.4■□□□□ 0.7
CMTM3Q96MX0 ZNRF2P2-203ENST00000454624 420 ntBASIC19.39■□□□□ 0.69
CMTM3Q96MX0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CMTM3Q96MX0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMTM3Q96MX0 ALDH1A3-203ENST00000557963 1670 ntBASIC19.39■□□□□ 0.69
CMTM3Q96MX0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CMTM3Q96MX0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CMTM3Q96MX0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CMTM3Q96MX0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.39■□□□□ 0.69
CMTM3Q96MX0 AL137060.1-201ENST00000618151 2648 ntBASIC19.38■□□□□ 0.69
CMTM3Q96MX0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms