Protein–RNA interactions for Protein: Q96BT1

C3orf49, Putative uncharacterized protein C3orf49, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49Q96BT1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
C3orf49Q96BT1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
C3orf49Q96BT1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.58■□□□□ 0.88
C3orf49Q96BT1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
C3orf49Q96BT1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C3orf49Q96BT1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.58■□□□□ 0.88
C3orf49Q96BT1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 AC068473.5-201ENST00000616428 2072 ntBASIC20.57■□□□□ 0.88
C3orf49Q96BT1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C3orf49Q96BT1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.57■□□□□ 0.88
C3orf49Q96BT1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C3orf49Q96BT1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C3orf49Q96BT1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
C3orf49Q96BT1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.56■□□□□ 0.88
C3orf49Q96BT1 Z92544.1-202ENST00000571933 1220 ntBASIC20.56■□□□□ 0.88
C3orf49Q96BT1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C3orf49Q96BT1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 AL451085.2-201ENST00000605085 799 ntBASIC20.55■□□□□ 0.88
C3orf49Q96BT1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.55■□□□□ 0.88
C3orf49Q96BT1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 C9orf163-202ENST00000624034 2573 ntBASIC20.54■□□□□ 0.88
C3orf49Q96BT1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 KRT125P-201ENST00000546827 989 ntBASIC20.54■□□□□ 0.88
C3orf49Q96BT1 MIR6722-201ENST00000617286 78 ntBASIC20.54■□□□□ 0.88
C3orf49Q96BT1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.54■□□□□ 0.88
C3orf49Q96BT1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 AC133561.1-201ENST00000568600 2415 ntBASIC20.53■□□□□ 0.88
C3orf49Q96BT1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 AC009299.2-201ENST00000482477 511 ntBASIC20.53■□□□□ 0.88
C3orf49Q96BT1 AC092028.1-203ENST00000608262 953 ntBASIC20.53■□□□□ 0.88
C3orf49Q96BT1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C3orf49Q96BT1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 AL035685.1-201ENST00000636663 812 ntBASIC20.52■□□□□ 0.88
C3orf49Q96BT1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C3orf49Q96BT1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
C3orf49Q96BT1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.52■□□□□ 0.87
C3orf49Q96BT1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.52■□□□□ 0.87
C3orf49Q96BT1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
C3orf49Q96BT1 AC079630.1-202ENST00000618127 1840 ntBASIC20.5■□□□□ 0.87
C3orf49Q96BT1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
C3orf49Q96BT1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
C3orf49Q96BT1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms