Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RNF25Q96BH1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.67■■□□□ 1.38
RNF25Q96BH1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF25Q96BH1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RNF25Q96BH1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF25Q96BH1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF25Q96BH1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF25Q96BH1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RNF25Q96BH1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF25Q96BH1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF25Q96BH1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF25Q96BH1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF25Q96BH1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF25Q96BH1 AL117328.2-201ENST00000624617 1940 ntBASIC23.65■■□□□ 1.38
RNF25Q96BH1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF25Q96BH1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF25Q96BH1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF25Q96BH1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RNF25Q96BH1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF25Q96BH1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF25Q96BH1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RNF25Q96BH1 AC092068.2-201ENST00000590491 1708 ntBASIC23.64■■□□□ 1.38
RNF25Q96BH1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
RNF25Q96BH1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF25Q96BH1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.64■■□□□ 1.38
RNF25Q96BH1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.64■■□□□ 1.38
RNF25Q96BH1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.64■■□□□ 1.38
RNF25Q96BH1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF25Q96BH1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF25Q96BH1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF25Q96BH1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF25Q96BH1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF25Q96BH1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF25Q96BH1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
RNF25Q96BH1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF25Q96BH1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF25Q96BH1 AC103724.3-201ENST00000564481 992 ntBASIC23.63■■□□□ 1.37
RNF25Q96BH1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF25Q96BH1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF25Q96BH1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF25Q96BH1 YBX1P4-201ENST00000392794 808 ntBASIC23.62■■□□□ 1.37
RNF25Q96BH1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF25Q96BH1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF25Q96BH1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF25Q96BH1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF25Q96BH1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF25Q96BH1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RNF25Q96BH1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF25Q96BH1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
RNF25Q96BH1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF25Q96BH1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF25Q96BH1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RNF25Q96BH1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF25Q96BH1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF25Q96BH1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
RNF25Q96BH1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF25Q96BH1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
RNF25Q96BH1 AC004448.1-201ENST00000458332 883 ntBASIC23.6■■□□□ 1.37
RNF25Q96BH1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF25Q96BH1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF25Q96BH1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF25Q96BH1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF25Q96BH1 DUSP8P3-201ENST00000399571 1760 ntBASIC23.6■■□□□ 1.37
RNF25Q96BH1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF25Q96BH1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF25Q96BH1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF25Q96BH1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
RNF25Q96BH1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
RNF25Q96BH1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF25Q96BH1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF25Q96BH1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF25Q96BH1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF25Q96BH1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
RNF25Q96BH1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF25Q96BH1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RNF25Q96BH1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF25Q96BH1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF25Q96BH1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF25Q96BH1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
RNF25Q96BH1 EP400NL-214ENST00000641289 2402 ntBASIC23.58■■□□□ 1.36
RNF25Q96BH1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RNF25Q96BH1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF25Q96BH1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF25Q96BH1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF25Q96BH1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF25Q96BH1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF25Q96BH1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF25Q96BH1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF25Q96BH1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF25Q96BH1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.56■■□□□ 1.36
RNF25Q96BH1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF25Q96BH1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RNF25Q96BH1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms