Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A1Q93096 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A1Q93096 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A1Q93096 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A1Q93096 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTP4A1Q93096 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.29■□□□□ 0.84
PTP4A1Q93096 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PTP4A1Q93096 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A1Q93096 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A1Q93096 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PTP4A1Q93096 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A1Q93096 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A1Q93096 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A1Q93096 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.28■□□□□ 0.84
PTP4A1Q93096 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A1Q93096 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.28■□□□□ 0.84
PTP4A1Q93096 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.28■□□□□ 0.84
PTP4A1Q93096 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A1Q93096 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
PTP4A1Q93096 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A1Q93096 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A1Q93096 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A1Q93096 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.27■□□□□ 0.84
PTP4A1Q93096 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A1Q93096 AC022616.5-201ENST00000518796 181 ntBASIC20.27■□□□□ 0.84
PTP4A1Q93096 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.27■□□□□ 0.84
PTP4A1Q93096 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A1Q93096 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.27■□□□□ 0.84
PTP4A1Q93096 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
PTP4A1Q93096 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A1Q93096 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.27■□□□□ 0.83
PTP4A1Q93096 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A1Q93096 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A1Q93096 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A1Q93096 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A1Q93096 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.26■□□□□ 0.83
PTP4A1Q93096 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PTP4A1Q93096 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.26■□□□□ 0.83
PTP4A1Q93096 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PTP4A1Q93096 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A1Q93096 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTP4A1Q93096 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A1Q93096 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A1Q93096 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A1Q93096 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTP4A1Q93096 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A1Q93096 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A1Q93096 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A1Q93096 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTP4A1Q93096 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.24■□□□□ 0.83
PTP4A1Q93096 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.24■□□□□ 0.83
PTP4A1Q93096 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A1Q93096 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.24■□□□□ 0.83
PTP4A1Q93096 AC010980.1-201ENST00000587192 1142 ntBASIC20.24■□□□□ 0.83
PTP4A1Q93096 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A1Q93096 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A1Q93096 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A1Q93096 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTP4A1Q93096 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
PTP4A1Q93096 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.23■□□□□ 0.83
PTP4A1Q93096 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.23■□□□□ 0.83
PTP4A1Q93096 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
PTP4A1Q93096 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A1Q93096 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A1Q93096 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.22■□□□□ 0.83
PTP4A1Q93096 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.22■□□□□ 0.83
PTP4A1Q93096 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.22■□□□□ 0.83
PTP4A1Q93096 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.22■□□□□ 0.83
PTP4A1Q93096 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.22■□□□□ 0.83
PTP4A1Q93096 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PTP4A1Q93096 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A1Q93096 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A1Q93096 GUSBP5-202ENST00000510805 1989 ntBASIC20.21■□□□□ 0.83
PTP4A1Q93096 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A1Q93096 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A1Q93096 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.21■□□□□ 0.83
PTP4A1Q93096 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms