Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.66■□□□□ 0.9
HTRA1Q92743 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA1Q92743 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA1Q92743 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTRA1Q92743 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.65■□□□□ 0.9
HTRA1Q92743 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTRA1Q92743 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
HTRA1Q92743 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
HTRA1Q92743 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HTRA1Q92743 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
HTRA1Q92743 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTRA1Q92743 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA1Q92743 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.64■□□□□ 0.89
HTRA1Q92743 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA1Q92743 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA1Q92743 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.64■□□□□ 0.89
HTRA1Q92743 AC074183.2-201ENST00000623112 922 ntBASIC20.64■□□□□ 0.89
HTRA1Q92743 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.64■□□□□ 0.89
HTRA1Q92743 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA1Q92743 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTRA1Q92743 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA1Q92743 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.63■□□□□ 0.89
HTRA1Q92743 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA1Q92743 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA1Q92743 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HTRA1Q92743 MIR6089-201ENST00000616698 64 ntBASIC20.63■□□□□ 0.89
HTRA1Q92743 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
HTRA1Q92743 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HTRA1Q92743 AC141586.4-201ENST00000624558 1573 ntBASIC20.63■□□□□ 0.89
HTRA1Q92743 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
HTRA1Q92743 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HTRA1Q92743 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HTRA1Q92743 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
HTRA1Q92743 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.62■□□□□ 0.89
HTRA1Q92743 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.62■□□□□ 0.89
HTRA1Q92743 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.62■□□□□ 0.89
HTRA1Q92743 AC007375.3-201ENST00000600936 2314 ntBASIC20.62■□□□□ 0.89
HTRA1Q92743 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.62■□□□□ 0.89
HTRA1Q92743 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HTRA1Q92743 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTRA1Q92743 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTRA1Q92743 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HTRA1Q92743 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.61■□□□□ 0.89
HTRA1Q92743 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTRA1Q92743 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HTRA1Q92743 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTRA1Q92743 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HTRA1Q92743 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
HTRA1Q92743 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
HTRA1Q92743 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.6■□□□□ 0.89
HTRA1Q92743 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HTRA1Q92743 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTRA1Q92743 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.6■□□□□ 0.89
HTRA1Q92743 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.6■□□□□ 0.89
HTRA1Q92743 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTRA1Q92743 AC009299.2-201ENST00000482477 511 ntBASIC20.6■□□□□ 0.89
HTRA1Q92743 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.6■□□□□ 0.89
HTRA1Q92743 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HTRA1Q92743 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTRA1Q92743 AC004812.2-201ENST00000611079 2094 ntBASIC20.6■□□□□ 0.89
HTRA1Q92743 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTRA1Q92743 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HTRA1Q92743 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTRA1Q92743 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
HTRA1Q92743 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 HLA-L-211ENST00000482052 1765 ntBASIC20.59■□□□□ 0.89
HTRA1Q92743 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HTRA1Q92743 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HTRA1Q92743 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HTRA1Q92743 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.59■□□□□ 0.89
HTRA1Q92743 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.59■□□□□ 0.89
HTRA1Q92743 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.59■□□□□ 0.89
HTRA1Q92743 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTRA1Q92743 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTRA1Q92743 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
HTRA1Q92743 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTRA1Q92743 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTRA1Q92743 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HTRA1Q92743 AL592295.1-201ENST00000400984 884 ntBASIC20.58■□□□□ 0.89
HTRA1Q92743 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.58■□□□□ 0.89
HTRA1Q92743 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTRA1Q92743 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HTRA1Q92743 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HTRA1Q92743 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.58■□□□□ 0.88
HTRA1Q92743 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.58■□□□□ 0.88
HTRA1Q92743 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HTRA1Q92743 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms