Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.47■■□□□ 1.03
TTC9Q92623 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC9Q92623 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TTC9Q92623 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TTC9Q92623 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC9Q92623 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.46■■□□□ 1.03
TTC9Q92623 KRT18P5-201ENST00000436075 1291 ntBASIC21.46■■□□□ 1.03
TTC9Q92623 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.46■■□□□ 1.03
TTC9Q92623 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC9Q92623 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC9Q92623 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC9Q92623 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TTC9Q92623 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TTC9Q92623 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.46■■□□□ 1.03
TTC9Q92623 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TTC9Q92623 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.45■■□□□ 1.02
TTC9Q92623 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
TTC9Q92623 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.45■■□□□ 1.02
TTC9Q92623 SLC47A1P1-202ENST00000449666 945 ntBASIC21.45■■□□□ 1.02
TTC9Q92623 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.45■■□□□ 1.02
TTC9Q92623 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.45■■□□□ 1.02
TTC9Q92623 AL138724.1-201ENST00000606771 1088 ntBASIC21.45■■□□□ 1.02
TTC9Q92623 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TTC9Q92623 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC9Q92623 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.44■■□□□ 1.02
TTC9Q92623 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.44■■□□□ 1.02
TTC9Q92623 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC9Q92623 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.44■■□□□ 1.02
TTC9Q92623 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.44■■□□□ 1.02
TTC9Q92623 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TTC9Q92623 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC9Q92623 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC9Q92623 AC142381.3-201ENST00000568208 1670 ntBASIC21.44■■□□□ 1.02
TTC9Q92623 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TTC9Q92623 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 AC133561.1-201ENST00000568600 2415 ntBASIC21.43■■□□□ 1.02
TTC9Q92623 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC9Q92623 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
TTC9Q92623 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 AC005703.6-201ENST00000623265 1329 ntBASIC21.43■■□□□ 1.02
TTC9Q92623 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC9Q92623 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC9Q92623 CLDN5-201ENST00000403084 2357 ntBASIC21.43■■□□□ 1.02
TTC9Q92623 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.42■■□□□ 1.02
TTC9Q92623 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.42■■□□□ 1.02
TTC9Q92623 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TTC9Q92623 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.42■■□□□ 1.02
TTC9Q92623 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
TTC9Q92623 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 AP003733.4-201ENST00000623785 1697 ntBASIC21.42■■□□□ 1.02
TTC9Q92623 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC9Q92623 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC9Q92623 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TTC9Q92623 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.41■■□□□ 1.02
TTC9Q92623 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TTC9Q92623 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.41■■□□□ 1.02
TTC9Q92623 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.4■■□□□ 1.02
TTC9Q92623 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.4■■□□□ 1.02
TTC9Q92623 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC9Q92623 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TTC9Q92623 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.4■■□□□ 1.02
TTC9Q92623 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.4■■□□□ 1.02
TTC9Q92623 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.4■■□□□ 1.02
TTC9Q92623 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC9Q92623 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.4■■□□□ 1.02
TTC9Q92623 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TTC9Q92623 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TTC9Q92623 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.4■■□□□ 1.02
TTC9Q92623 AC099791.2-201ENST00000605725 427 ntBASIC21.4■■□□□ 1.02
TTC9Q92623 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.4■■□□□ 1.02
TTC9Q92623 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC9Q92623 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms