Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 C9orf163-202ENST00000624034 2573 ntBASIC20.78■□□□□ 0.92
CNOT9Q92600 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.78■□□□□ 0.92
CNOT9Q92600 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNOT9Q92600 AC092068.2-201ENST00000590491 1708 ntBASIC20.78■□□□□ 0.92
CNOT9Q92600 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT9Q92600 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNOT9Q92600 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.77■□□□□ 0.92
CNOT9Q92600 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CNOT9Q92600 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.77■□□□□ 0.92
CNOT9Q92600 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.77■□□□□ 0.92
CNOT9Q92600 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CNOT9Q92600 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.77■□□□□ 0.92
CNOT9Q92600 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT9Q92600 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CNOT9Q92600 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.76■□□□□ 0.91
CNOT9Q92600 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.76■□□□□ 0.91
CNOT9Q92600 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT9Q92600 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT9Q92600 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT9Q92600 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.76■□□□□ 0.91
CNOT9Q92600 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT9Q92600 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT9Q92600 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.76■□□□□ 0.91
CNOT9Q92600 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.76■□□□□ 0.91
CNOT9Q92600 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.76■□□□□ 0.91
CNOT9Q92600 AC068473.5-201ENST00000616428 2072 ntBASIC20.76■□□□□ 0.91
CNOT9Q92600 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT9Q92600 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CNOT9Q92600 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.75■□□□□ 0.91
CNOT9Q92600 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.75■□□□□ 0.91
CNOT9Q92600 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.75■□□□□ 0.91
CNOT9Q92600 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.75■□□□□ 0.91
CNOT9Q92600 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.75■□□□□ 0.91
CNOT9Q92600 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.75■□□□□ 0.91
CNOT9Q92600 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
CNOT9Q92600 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNOT9Q92600 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.75■□□□□ 0.91
CNOT9Q92600 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNOT9Q92600 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.74■□□□□ 0.91
CNOT9Q92600 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 AL451085.2-201ENST00000605085 799 ntBASIC20.74■□□□□ 0.91
CNOT9Q92600 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNOT9Q92600 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CNOT9Q92600 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT9Q92600 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT9Q92600 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNOT9Q92600 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT9Q92600 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNOT9Q92600 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT9Q92600 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CNOT9Q92600 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT9Q92600 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CNOT9Q92600 AC009299.2-201ENST00000482477 511 ntBASIC20.72■□□□□ 0.91
CNOT9Q92600 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.72■□□□□ 0.91
CNOT9Q92600 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT9Q92600 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CNOT9Q92600 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CNOT9Q92600 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
CNOT9Q92600 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.72■□□□□ 0.91
CNOT9Q92600 DUSP8P3-201ENST00000399571 1760 ntBASIC20.72■□□□□ 0.91
CNOT9Q92600 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNOT9Q92600 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT9Q92600 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT9Q92600 AC012676.1-201ENST00000574705 1949 ntBASIC20.71■□□□□ 0.91
CNOT9Q92600 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.71■□□□□ 0.91
CNOT9Q92600 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CNOT9Q92600 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.71■□□□□ 0.91
CNOT9Q92600 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.71■□□□□ 0.91
CNOT9Q92600 KRT125P-201ENST00000546827 989 ntBASIC20.71■□□□□ 0.91
CNOT9Q92600 Z92544.1-202ENST00000571933 1220 ntBASIC20.71■□□□□ 0.91
CNOT9Q92600 AC092028.1-203ENST00000608262 953 ntBASIC20.71■□□□□ 0.91
CNOT9Q92600 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.71■□□□□ 0.91
CNOT9Q92600 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT9Q92600 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNOT9Q92600 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms