Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S1Q92572 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.89■□□□□ 0.77
AP3S1Q92572 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
AP3S1Q92572 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AP3S1Q92572 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
AP3S1Q92572 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.88■□□□□ 0.77
AP3S1Q92572 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3S1Q92572 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.88■□□□□ 0.77
AP3S1Q92572 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S1Q92572 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3S1Q92572 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
AP3S1Q92572 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S1Q92572 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S1Q92572 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.88■□□□□ 0.77
AP3S1Q92572 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.87■□□□□ 0.77
AP3S1Q92572 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.87■□□□□ 0.77
AP3S1Q92572 MIR3960-201ENST00000583311 91 ntBASIC19.87■□□□□ 0.77
AP3S1Q92572 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
AP3S1Q92572 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.87■□□□□ 0.77
AP3S1Q92572 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S1Q92572 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.86■□□□□ 0.77
AP3S1Q92572 SLC25A24-204ENST00000569674 2357 ntBASIC19.86■□□□□ 0.77
AP3S1Q92572 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.86■□□□□ 0.77
AP3S1Q92572 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
AP3S1Q92572 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.86■□□□□ 0.77
AP3S1Q92572 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S1Q92572 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
AP3S1Q92572 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
AP3S1Q92572 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.85■□□□□ 0.77
AP3S1Q92572 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
AP3S1Q92572 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
AP3S1Q92572 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S1Q92572 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
AP3S1Q92572 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S1Q92572 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
AP3S1Q92572 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S1Q92572 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S1Q92572 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S1Q92572 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3S1Q92572 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S1Q92572 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
AP3S1Q92572 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
AP3S1Q92572 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3S1Q92572 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S1Q92572 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
AP3S1Q92572 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S1Q92572 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S1Q92572 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.83■□□□□ 0.77
AP3S1Q92572 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.83■□□□□ 0.77
AP3S1Q92572 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.83■□□□□ 0.77
AP3S1Q92572 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.83■□□□□ 0.77
AP3S1Q92572 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S1Q92572 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.83■□□□□ 0.77
AP3S1Q92572 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S1Q92572 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S1Q92572 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S1Q92572 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
AP3S1Q92572 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S1Q92572 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
AP3S1Q92572 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S1Q92572 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
AP3S1Q92572 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.76
AP3S1Q92572 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S1Q92572 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.83■□□□□ 0.76
AP3S1Q92572 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
AP3S1Q92572 C11orf96-202ENST00000528572 1834 ntBASIC19.82■□□□□ 0.76
AP3S1Q92572 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S1Q92572 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S1Q92572 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S1Q92572 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S1Q92572 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S1Q92572 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
AP3S1Q92572 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.82■□□□□ 0.76
AP3S1Q92572 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
AP3S1Q92572 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S1Q92572 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
AP3S1Q92572 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
AP3S1Q92572 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S1Q92572 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP3S1Q92572 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S1Q92572 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.81■□□□□ 0.76
AP3S1Q92572 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S1Q92572 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
AP3S1Q92572 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
AP3S1Q92572 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S1Q92572 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms