Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 AC138932.3-201ENST00000567634 1902 ntBASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC35.59■■■■□ 3.29
CASKIN1Q8WXD9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC35.58■■■■□ 3.29
CASKIN1Q8WXD9 pRNA.6-201ENST00000610482 90 ntBASIC35.58■■■■□ 3.29
CASKIN1Q8WXD9 pRNA.5-201ENST00000612139 90 ntBASIC35.58■■■■□ 3.29
CASKIN1Q8WXD9 pRNA.11-201ENST00000618423 90 ntBASIC35.58■■■■□ 3.29
CASKIN1Q8WXD9 pRNA.13-201ENST00000619112 90 ntBASIC35.58■■■■□ 3.29
CASKIN1Q8WXD9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CASKIN1Q8WXD9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC35.57■■■■□ 3.29
CASKIN1Q8WXD9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC35.57■■■■□ 3.29
CASKIN1Q8WXD9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.28
CASKIN1Q8WXD9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC35.57■■■■□ 3.28
CASKIN1Q8WXD9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC35.57■■■■□ 3.28
CASKIN1Q8WXD9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
CASKIN1Q8WXD9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CASKIN1Q8WXD9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC35.56■■■■□ 3.28
CASKIN1Q8WXD9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CASKIN1Q8WXD9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.56■■■■□ 3.28
CASKIN1Q8WXD9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
CASKIN1Q8WXD9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC35.55■■■■□ 3.28
CASKIN1Q8WXD9 SLC47A1P1-202ENST00000449666 945 ntBASIC35.55■■■■□ 3.28
CASKIN1Q8WXD9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CASKIN1Q8WXD9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CASKIN1Q8WXD9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
CASKIN1Q8WXD9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC35.54■■■■□ 3.28
CASKIN1Q8WXD9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CASKIN1Q8WXD9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC35.54■■■■□ 3.28
CASKIN1Q8WXD9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CASKIN1Q8WXD9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC35.53■■■■□ 3.28
CASKIN1Q8WXD9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CASKIN1Q8WXD9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CASKIN1Q8WXD9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC35.53■■■■□ 3.28
CASKIN1Q8WXD9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CASKIN1Q8WXD9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CASKIN1Q8WXD9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC35.52■■■■□ 3.28
CASKIN1Q8WXD9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC35.52■■■■□ 3.28
CASKIN1Q8WXD9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CASKIN1Q8WXD9 AC135731.1-201ENST00000569415 2548 ntBASIC35.52■■■■□ 3.28
CASKIN1Q8WXD9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 IRS3P-201ENST00000223076 1006 ntBASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 AC087623.3-201ENST00000607047 1098 ntBASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC35.51■■■■□ 3.28
CASKIN1Q8WXD9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CASKIN1Q8WXD9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CASKIN1Q8WXD9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC35.5■■■■□ 3.27
CASKIN1Q8WXD9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.5■■■■□ 3.27
CASKIN1Q8WXD9 ANKRD20A6P-201ENST00000618763 204 ntBASIC35.5■■■■□ 3.27
CASKIN1Q8WXD9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
CASKIN1Q8WXD9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
CASKIN1Q8WXD9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC35.48■■■■□ 3.27
CASKIN1Q8WXD9 EED-207ENST00000528180 1745 ntTSL 5 BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 AC104564.3-201ENST00000582367 638 ntBASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CASKIN1Q8WXD9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 AL499627.2-201ENST00000606283 725 ntBASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
CASKIN1Q8WXD9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CASKIN1Q8WXD9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC35.45■■■■□ 3.26
CASKIN1Q8WXD9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CASKIN1Q8WXD9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC35.44■■■■□ 3.26
CASKIN1Q8WXD9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC35.44■■■■□ 3.26
CASKIN1Q8WXD9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC35.44■■■■□ 3.26
CASKIN1Q8WXD9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CASKIN1Q8WXD9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CASKIN1Q8WXD9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CASKIN1Q8WXD9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms