Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 AC090877.2-201ENST00000558441 1738 ntBASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 LINC00565-201ENST00000562710 2331 ntBASIC18.94■□□□□ 0.62
RTN4IP1Q8WWV3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 C1orf229-201ENST00000623686 2258 ntBASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN4IP1Q8WWV3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 PVT1_1.1-201ENST00000615125 194 ntBASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN4IP1Q8WWV3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.91■□□□□ 0.62
RTN4IP1Q8WWV3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RTN4IP1Q8WWV3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RTN4IP1Q8WWV3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RTN4IP1Q8WWV3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 AC011551.1-201ENST00000614101 683 ntBASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.89■□□□□ 0.61
RTN4IP1Q8WWV3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4IP1Q8WWV3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
RTN4IP1Q8WWV3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms