Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 TSPY13P-201ENST00000338964 914 ntBASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 KRT18P24-201ENST00000344739 1156 ntBASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 AL117328.2-201ENST00000624617 1940 ntBASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 EP400NL-214ENST00000641289 2402 ntBASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNRF4Q8WWF5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
ZNRF4Q8WWF5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
ZNRF4Q8WWF5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZNRF4Q8WWF5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNRF4Q8WWF5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNRF4Q8WWF5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 THA1P-201ENST00000590384 1145 ntBASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 AC074183.2-201ENST00000623112 922 ntBASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNRF4Q8WWF5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNRF4Q8WWF5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNRF4Q8WWF5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNRF4Q8WWF5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNRF4Q8WWF5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNRF4Q8WWF5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNRF4Q8WWF5 AC079630.1-202ENST00000618127 1840 ntBASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNRF4Q8WWF5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNRF4Q8WWF5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNRF4Q8WWF5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
ZNRF4Q8WWF5 AC004448.1-201ENST00000458332 883 ntBASIC20.08■□□□□ 0.81
ZNRF4Q8WWF5 AC103834.1-201ENST00000520383 144 ntBASIC20.08■□□□□ 0.81
ZNRF4Q8WWF5 AL033527.3-201ENST00000566366 1196 ntBASIC20.08■□□□□ 0.81
ZNRF4Q8WWF5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNRF4Q8WWF5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms