Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST4Q8NFU0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
BEST4Q8NFU0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BEST4Q8NFU0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BEST4Q8NFU0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST4Q8NFU0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BEST4Q8NFU0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.39■□□□□ 0.7
BEST4Q8NFU0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
BEST4Q8NFU0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST4Q8NFU0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BEST4Q8NFU0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.39■□□□□ 0.69
BEST4Q8NFU0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST4Q8NFU0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BEST4Q8NFU0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BEST4Q8NFU0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BEST4Q8NFU0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
BEST4Q8NFU0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BEST4Q8NFU0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 AC007029.1-201ENST00000604183 313 ntBASIC19.35■□□□□ 0.69
BEST4Q8NFU0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BEST4Q8NFU0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
BEST4Q8NFU0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms