Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.52■■□□□ 1.03
SRFBP1Q8NEF9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRFBP1Q8NEF9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.5■■□□□ 1.03
SRFBP1Q8NEF9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRFBP1Q8NEF9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.49■■□□□ 1.03
SRFBP1Q8NEF9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRFBP1Q8NEF9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SRFBP1Q8NEF9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.49■■□□□ 1.03
SRFBP1Q8NEF9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SRFBP1Q8NEF9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.48■■□□□ 1.03
SRFBP1Q8NEF9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRFBP1Q8NEF9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.48■■□□□ 1.03
SRFBP1Q8NEF9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SRFBP1Q8NEF9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.48■■□□□ 1.03
SRFBP1Q8NEF9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SRFBP1Q8NEF9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SRFBP1Q8NEF9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 AC092068.2-201ENST00000590491 1708 ntBASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 ANOS2P-203ENST00000472227 1816 ntBASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SRFBP1Q8NEF9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SRFBP1Q8NEF9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 AL356740.2-201ENST00000601559 647 ntBASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.43■■□□□ 1.02
SRFBP1Q8NEF9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SRFBP1Q8NEF9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SRFBP1Q8NEF9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms