Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 KRT18P60-201ENST00000312876 1297 ntBASIC19.32■□□□□ 0.68
TMEM104Q8NE00 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM104Q8NE00 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM104Q8NE00 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM104Q8NE00 LINC00565-201ENST00000562710 2331 ntBASIC19.29■□□□□ 0.68
TMEM104Q8NE00 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TMEM104Q8NE00 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 GUSBP5-202ENST00000510805 1989 ntBASIC19.28■□□□□ 0.68
TMEM104Q8NE00 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM104Q8NE00 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM104Q8NE00 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM104Q8NE00 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 NTF6A-201ENST00000591175 560 ntBASIC19.26■□□□□ 0.67
TMEM104Q8NE00 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM104Q8NE00 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 AC019171.1-201ENST00000601251 1056 ntBASIC19.25■□□□□ 0.67
TMEM104Q8NE00 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM104Q8NE00 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM104Q8NE00 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms