Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
PNMA1Q8ND90 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PNMA1Q8ND90 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PNMA1Q8ND90 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 AC096631.2-201ENST00000436136 790 ntBASIC26.35■■□□□ 1.81
PNMA1Q8ND90 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PNMA1Q8ND90 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 AC093323.1-202ENST00000635031 2045 ntBASIC26.34■■□□□ 1.81
PNMA1Q8ND90 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PNMA1Q8ND90 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 AC099791.2-201ENST00000605725 427 ntBASIC26.33■■□□□ 1.81
PNMA1Q8ND90 AC110285.6-201ENST00000617652 491 ntBASIC26.33■■□□□ 1.81
PNMA1Q8ND90 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PNMA1Q8ND90 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PNMA1Q8ND90 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
PNMA1Q8ND90 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.32■■□□□ 1.8
PNMA1Q8ND90 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA1Q8ND90 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA1Q8ND90 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA1Q8ND90 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
PNMA1Q8ND90 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PNMA1Q8ND90 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.31■■□□□ 1.8
PNMA1Q8ND90 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PNMA1Q8ND90 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 AL139246.5-201ENST00000606645 996 ntBASIC26.29■■□□□ 1.8
PNMA1Q8ND90 AC241377.3-202ENST00000626088 1088 ntBASIC26.29■■□□□ 1.8
PNMA1Q8ND90 AC241585.3-202ENST00000628937 1088 ntBASIC26.29■■□□□ 1.8
PNMA1Q8ND90 AC245100.8-202ENST00000629247 1058 ntBASIC26.29■■□□□ 1.8
PNMA1Q8ND90 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
PNMA1Q8ND90 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 UNC93B3-201ENST00000308076 687 ntBASIC26.28■■□□□ 1.8
PNMA1Q8ND90 AC092171.4-201ENST00000609130 632 ntBASIC26.28■■□□□ 1.8
PNMA1Q8ND90 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PNMA1Q8ND90 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PNMA1Q8ND90 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PNMA1Q8ND90 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.27■■□□□ 1.8
PNMA1Q8ND90 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.27■■□□□ 1.8
PNMA1Q8ND90 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms