Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.88■■□□□ 1.57
RNF149Q8NC42 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF149Q8NC42 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RNF149Q8NC42 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
RNF149Q8NC42 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.87■■□□□ 1.57
RNF149Q8NC42 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF149Q8NC42 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF149Q8NC42 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF149Q8NC42 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RNF149Q8NC42 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF149Q8NC42 AC241377.3-202ENST00000626088 1088 ntBASIC24.87■■□□□ 1.57
RNF149Q8NC42 AC241585.3-202ENST00000628937 1088 ntBASIC24.87■■□□□ 1.57
RNF149Q8NC42 AC245100.8-202ENST00000629247 1058 ntBASIC24.87■■□□□ 1.57
RNF149Q8NC42 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RNF149Q8NC42 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF149Q8NC42 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF149Q8NC42 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RNF149Q8NC42 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF149Q8NC42 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RNF149Q8NC42 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.86■■□□□ 1.57
RNF149Q8NC42 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.86■■□□□ 1.57
RNF149Q8NC42 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.86■■□□□ 1.57
RNF149Q8NC42 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.86■■□□□ 1.57
RNF149Q8NC42 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF149Q8NC42 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.86■■□□□ 1.57
RNF149Q8NC42 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RNF149Q8NC42 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF149Q8NC42 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.85■■□□□ 1.57
RNF149Q8NC42 SERBP1P1-201ENST00000396021 1160 ntBASIC24.85■■□□□ 1.57
RNF149Q8NC42 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF149Q8NC42 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RNF149Q8NC42 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF149Q8NC42 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RNF149Q8NC42 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RNF149Q8NC42 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RNF149Q8NC42 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF149Q8NC42 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.84■■□□□ 1.57
RNF149Q8NC42 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.84■■□□□ 1.57
RNF149Q8NC42 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.84■■□□□ 1.57
RNF149Q8NC42 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RNF149Q8NC42 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.83■■□□□ 1.57
RNF149Q8NC42 AC006455.2-201ENST00000429931 906 ntBASIC24.83■■□□□ 1.57
RNF149Q8NC42 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.83■■□□□ 1.57
RNF149Q8NC42 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.83■■□□□ 1.57
RNF149Q8NC42 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.83■■□□□ 1.57
RNF149Q8NC42 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.83■■□□□ 1.57
RNF149Q8NC42 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RNF149Q8NC42 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
RNF149Q8NC42 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RNF149Q8NC42 AC009086.3-201ENST00000623486 1008 ntBASIC24.82■■□□□ 1.56
RNF149Q8NC42 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF149Q8NC42 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF149Q8NC42 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RNF149Q8NC42 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.82■■□□□ 1.56
RNF149Q8NC42 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF149Q8NC42 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RNF149Q8NC42 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF149Q8NC42 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
RNF149Q8NC42 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF149Q8NC42 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RNF149Q8NC42 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.81■■□□□ 1.56
RNF149Q8NC42 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.81■■□□□ 1.56
RNF149Q8NC42 ABCB10P4-201ENST00000566803 2184 ntBASIC24.81■■□□□ 1.56
RNF149Q8NC42 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RNF149Q8NC42 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF149Q8NC42 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF149Q8NC42 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.8■■□□□ 1.56
RNF149Q8NC42 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RNF149Q8NC42 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
RNF149Q8NC42 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.8■■□□□ 1.56
RNF149Q8NC42 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RNF149Q8NC42 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF149Q8NC42 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF149Q8NC42 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
RNF149Q8NC42 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RNF149Q8NC42 AL031432.3-201ENST00000607698 485 ntBASIC24.79■■□□□ 1.56
RNF149Q8NC42 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.79■■□□□ 1.56
RNF149Q8NC42 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.79■■□□□ 1.56
RNF149Q8NC42 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RNF149Q8NC42 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.78■■□□□ 1.56
RNF149Q8NC42 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF149Q8NC42 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF149Q8NC42 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.78■■□□□ 1.56
RNF149Q8NC42 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.78■■□□□ 1.56
RNF149Q8NC42 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF149Q8NC42 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RNF149Q8NC42 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.78■■□□□ 1.56
RNF149Q8NC42 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RNF149Q8NC42 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
RNF149Q8NC42 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF149Q8NC42 EDA-201ENST00000338901 1233 ntBASIC24.77■■□□□ 1.56
RNF149Q8NC42 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF149Q8NC42 MIR4767-201ENST00000582827 78 ntBASIC24.77■■□□□ 1.56
RNF149Q8NC42 AL138724.1-201ENST00000606771 1088 ntBASIC24.77■■□□□ 1.56
RNF149Q8NC42 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.77■■□□□ 1.56
RNF149Q8NC42 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF149Q8NC42 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RNF149Q8NC42 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.77■■□□□ 1.56
RNF149Q8NC42 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
RNF149Q8NC42 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms